rVista 2.0 :: Identification of Evolutionary Conserved Transcription ...
Analyzing novel sequences for the presence of known transcription factor binding sites or their weight matrices produces a huge number of false positive predictions that are randomly and uniformily ...
Escherichia coli Transcription Factor Binding Sites
Transcription Factor Binding Sites. This site presents transcription factor binding site predictions in the E. coli genome made by cross-species comparison (i.e. phylogenetic footprinting) using a ...
- bayesweb.wadsworth.org/binding_sites/index.html
multiTF :: Identification of Transcription Factor Binding Sites ...
... identifies transcription factor binding sites conserved across multiple species
The Effects of Selection Against Spurious Transcription Factor Binding ...
The Effects of Selection Against Spurious Transcription Factor Binding Sites Matthew W. Hahn , Jason E. Stajich and Gregory A. Wray. Department of Biology, Duke University
- mbe.oxfordjournals.org/cgi/content/abstract/20/6/901
TFSEARCH: Searching Transcription Factor Binding Sites
Searching Transcription Factor Binding Sites (ver 1.3) Notice to TFSEARCH users ... Help. Enter a label for the sequence: Enter your DNA sequence below (by copy & paste)
- www.cbrc.jp/research/db/TFSEARCH.html
TRANSFAC-The Transcription Factor Database
PathoDB ® is a database on pathologically relevant mutated forms of transcription factors and transcription factor binding sites. In the public version, the user will find data on p53 mutations, which ...
- www.gene-regulation.com/pub/databases.html
AMB Community » Thousands of Previously Unknown Transcription Factor ...
between the actual and predicted number of transcription factor binding sites using ChIP-on-chip technology. Struhl: Chromatin immunoprecipitation is a powerful technique for locating binding sites ...
- microarraybulletin.com/community/article.php?p=44
Annotating significant pairs of transcription factor binding sites in ...
Annotating significant pairs of transcription factor binding sites in regulatory DNA Katja Rateitschak 1 *, Tobias Müller 2 and Martin Vingron. Max Planck Institute for Molecular Genetics
- www.bioinfo.de/isb/2004/04/0040/main.html
Drosophila DNase I footprint database: a systematic genome annotation ...
Drosophila DNase I footprint database: a systematic genome annotation of transcription factor binding sites in the fruitfly, Drosophila melanogaster Casey M.
- bioinformatics.oxfordjournals.org/cgi/content/full/21/8/1747
AthaMap: an online resource for in silico transcription factor binding ...
AthaMap: an online resource for in silico transcription factor binding sites in the Arabidopsis thaliana genome Nils Ole Steffens , Claudia Galuschka , Martin Schindler , Lorenz Bülow and Reinhard Hehl
- nar.oxfordjournals.org/cgi/content/abstract/32/suppl_1/D368
